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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109216390_109217077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109216390 - 109217077

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

CATTCTCTGACG

Flanking Amino Acid:

EAQRYYILTQGPLPNTCCHF

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

77.9

38.6

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

71.7

0.49

0.9

65.4

35.3

Minor 5ss

39.5

-1.2

3.2

55.8

48.4

Minor BPS

53.4

-0

1.8

59.97

42.1

Associated Gene:

Gene:

PTPN2

Ensembl Gene ID:

ENSAPLG00000009603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010045

109196483 - 109227485

31003