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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109381148_109383989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109381148 - 109383989

Intron Length:

2842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GTTTCATTATTT

Flanking Amino Acid:

VRKCFDSMSRLDPRIIQPFL

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

84.1

30.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

82.4

0.73

0.8

74.9

39.5

Minor 5ss

43.3

-0.7

2.8

49.9

46.4

Minor BPS

62.4

0.47

1.9

82.13

39.2

Associated Gene:

Gene:

RB1CC1

Ensembl Gene ID:

ENSAPLG00000003339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037091

109368103 - 109405240

37138

ENSAPLT00000003463

109367179 - 109413009

45831