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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109384161_109390755_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109384161 - 109390755

Intron Length:

6595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACAA

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

TTATTACAAACT

Flanking Amino Acid:

LVNEQKELAQGFLANQKRAE

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.7

36.3

Major BPS

74.8

0.62

1.1

40.5

Major PPT

88.2

0.86

0.6

81.7

30.3

Minor 5ss

31.3

-2.1

39.2

Minor BPS

47.6

-0.1

2.2

74.51

41.9

Associated Gene:

Gene:

RB1CC1

Ensembl Gene ID:

ENSAPLG00000003339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037091

109368103 - 109405240

37138

ENSAPLT00000003463

109367179 - 109413009

45831