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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109390941_109393550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109390941 - 109393550

Intron Length:

2610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATCTTCTAAAGT

Flanking Amino Acid:

ELANNLQVRLKWCCFVMLHA

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.2

26.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

77.6

0.62

0.8

72.4

32.2

Minor 5ss

42.2

-0.9

2.8

52.8

38.5

Minor BPS

54.3

0.21

73.16

44.2

Associated Gene:

Gene:

RB1CC1

Ensembl Gene ID:

ENSAPLG00000003339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037091

109368103 - 109405240

37138

ENSAPLT00000003463

109367179 - 109413009

45831