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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109393738_109393817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109393738 - 109393817

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTCCGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TATAAATTAACT

Flanking Amino Acid:

RKMFIKHYREWAGALIKDGK

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

74.5

0.61

79.6

29.1

Major PPT

79.7

0.67

0.7

76.8

25.3

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

0.42

1.8

81.01

39.5

Associated Gene:

Gene:

RB1CC1

Ensembl Gene ID:

ENSAPLG00000003339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037091

109368103 - 109405240

37138

ENSAPLT00000003463

109367179 - 109413009

45831