Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_109394819_109395801_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109394819 - 109395801

Intron Length:

983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTATGTACT

5'SS Class:

major

3'SS Sequence:

CTTCTTAATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTCTTCTTAATA

Flanking Amino Acid:

GLDSWPPSFCTRKPRRFDSE

Intron Amino Acid Position:

569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

70.1

40.1

Major BPS

0.82

0.8

24.9

Major PPT

78.7

0.65

0.9

73.4

34.8

Minor 5ss

46.4

-0.4

2.5

61.8

42.4

Minor BPS

80.7

0.96

82.43

32.9

Associated Gene:

Gene:

RB1CC1

Ensembl Gene ID:

ENSAPLG00000003339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037091

109368103 - 109405240

37138

ENSAPLT00000003463

109367179 - 109413009

45831