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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109395906_109397983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109395906 - 109397983

Intron Length:

2078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCAC

5'SS Class:

strong_major

3'SS Sequence:

TACTGTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAA

U12 Branch Point Sequence:

TAATCCTGTACT

Flanking Amino Acid:

FCPSEVQPLLRVPILCDFEP

Intron Amino Acid Position:

603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

74.7

35.6

Major BPS

58.5

0.21

1.1

59.9

32.5

Major PPT

71.6

0.49

1.1

75.1

38.5

Minor 5ss

33.9

-1.8

43.8

43.9

Minor BPS

0.46

1.8

79.45

41.9

Associated Gene:

Gene:

RB1CC1

Ensembl Gene ID:

ENSAPLG00000003339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037091

109368103 - 109405240

37138

ENSAPLT00000003463

109367179 - 109413009

45831