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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109524377_109526651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109524377 - 109526651

Intron Length:

2275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TTTTGTTTTACA

Flanking Amino Acid:

HNTRDCSTPAYYKRCARLLT

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

73.5

37.9

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

92.5

0.96

0.7

87.5

Minor 5ss

44.5

-0.6

2.9

64.2

41.4

Minor BPS

61.2

0.34

2.1

78.96

37.6

Associated Gene:

Gene:

ALKAL1

Ensembl Gene ID:

ENSAPLG00000017834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030596

109493890 - 109529230

35341