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Intron Name: Anas_platyrhynchos_platyrhynchos_2_10954153_10960808_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10954153 - 10960808

Intron Length:
6656

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATGAA

5'SS Class:
strong_major

3'SS Sequence:
TTTGTGATCATAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAT

U12 Branch Point Sequence:
TCTTTTGTGATC

Flanking Amino Acid:
FLYSQLELHLSKRREDWERS

Intron Amino Acid Position:
441

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.9
0.87
0.9
80
27.6

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
71.6
0.49
0.9
65.9
39.7

Minor 5ss
31.4
-2.1
3.2
39.9
46.1

Minor BPS
49.1
-0
2
63.72
37.2

Associated Gene:

Gene:
ADARB2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10917225 - 11045478
128254