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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109639606_109741815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

109639606 - 109741815

Intron Length:

102210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTTAATATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTGTGTTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

84.4

0.85

34.5

Major PPT

74.1

0.54

43.8

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

57.8

0.24

2.1

74.1

38.6

Associated Gene:

Gene:

ST18

Ensembl Gene ID:

ENSAPLG00000003822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031902

109638485 - 109810149

171665

ENSAPLT00000003915

109624874 - 109810149

185276

ENSAPLT00000041585

109638485 - 109810149

171665