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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109759837_109764120_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
109759837 - 109764120

Intron Length:
4284

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGTCATG

5'SS Class:
major

3'SS Sequence:
TTTTAATATATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATA

Flanking Amino Acid:
ISVLESSSAPEDRNPKPSEE

Intron Amino Acid Position:
93

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.5
0.48
1.1
65.5
45.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
75.7
0.58
0.9
70.7
39

Minor 5ss
41.7
-0.9
3.2
57
47.4

Minor BPS
82.2
1.01
0.9
86.33
25.3

Associated Gene:

Gene:
ST18

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

109638485 - 109810149
171665

109638485 - 109810149
171665

109624874 - 109810149
185276