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Intron Name: Anas_platyrhynchos_platyrhynchos_2_109873586_109873859_R

Intron Information:

Intron Rank:

138261

Intron Class:

major

Intron Phase:

Intron Coordinates:

109873586 - 109873859

Intron Length:

274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTTCCATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTTCTTTCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

39.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

86.6

0.82

0.7

81.2

29.4

Minor 5ss

38.9

-1.3

3.4

55.1

43.4

Minor BPS

48.2

-0

1.9

72.72

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026709

109873188 - 109874591

1404