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Intron Name: Anas_platyrhynchos_platyrhynchos_2_11026572_11045435_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
11026572 - 11045435

Intron Length:
18864

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAGGTAAG

5'SS Class:
major

3'SS Sequence:
TGTTTTCTTCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TATTTTTTATTC

Flanking Amino Acid:
LKDKLNVFYIEKLSILSTFI

Intron Amino Acid Position:
15

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.6
0.67
1
70.6
41.3

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
84.8
0.78
0.7
77.9
36.6

Minor 5ss
33.8
-1.8
3
38.2
41.2

Minor BPS
62.3
0.36
1.5
70.52
35.3

Associated Gene:

Gene:
ADARB2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10917225 - 11045478
128254