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Intron Name: Anas_platyrhynchos_platyrhynchos_2_110427510_110438763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110427510 - 110438763

Intron Length:

11254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAAAT

Flanking Amino Acid:

NVRKCRHEEVVFSCHELLHH

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

76.6

34.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.6

0.58

0.9

72.4

37.8

Minor 5ss

44.5

-0.6

3.1

61.3

44.6

Minor BPS

67.7

0.64

1.5

85.71

33.9

Associated Gene:

Gene:

SNTG1

Ensembl Gene ID:

ENSAPLG00000003975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037281

110312204 - 110452062

139859

ENSAPLT00000035887

110312204 - 110462474

150271

ENSAPLT00000004086

110312204 - 110474538

162335