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Intron Name: Anas_platyrhynchos_platyrhynchos_2_11047817_11052881_F

Intron Information:

Intron Rank:

149655

Intron Class:

major

Intron Phase:

Intron Coordinates:

11047817 - 11052881

Intron Length:

5065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCATTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

83.8

0.76

0.8

77.1

36.9

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

65.8

0.58

1.6

84.06

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042011

11047435 - 11060870

13436