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Intron Name: Anas_platyrhynchos_platyrhynchos_2_11053072_11060457_F

Intron Information:

Intron Rank:

149654

Intron Class:

major

Intron Phase:

Intron Coordinates:

11053072 - 11060457

Intron Length:

7386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

CTCCACGACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTCTCCACGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

60.1

0.23

52.8

35.5

Minor 5ss

36.1

-1.6

2.6

Minor BPS

55.5

0.17

1.9

72.04

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042011

11047435 - 11060870

13436

ENSAPLT00000036807

11052187 - 11060870

8684