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Intron Name: Anas_platyrhynchos_platyrhynchos_2_110986405_110986492_R

Intron Information:

Intron Rank:

17420

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

110986405 - 110986492

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATTGTTC

5'SS Class:

weak_major

3'SS Sequence:

TCCCTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TAGTGTCTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.1

61.1

38.1

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

86.7

0.83

0.7

79.5

32.5

Minor 5ss

47.6

-0.2

64.2

42.7

Minor BPS

49.5

-0

2.1

64.93

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003940

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038910

110986305 - 111000150

13846

ENSAPLT00000004027

110978680 - 110987452

8773