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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1112100_1122066_R

Intron Information:

Intron Rank:

133002

Intron Class:

major

Intron Phase:

Intron Coordinates:

1112100 - 1122066

Intron Length:

9967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TCTAATGTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

74.7

41.5

Major BPS

82.2

0.8

0.9

81.6

Major PPT

100

1.12

0.4

100

Minor 5ss

40.3

-1.1

3.1

54.9

42.3

Minor BPS

41.9

-0.6

2.3

55.41

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040875

1111629 - 1122595

10967

ENSAPLT00000034382

1111629 - 1122595

10967