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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111338087_111339086_R

Intron Information:

Intron Rank:

129735

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

111338087 - 111339086

Intron Length:

1000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTCT

5'SS Class:

weak_major

3'SS Sequence:

TTGCCTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATGGAT

U12 Branch Point Sequence:

TCTTGCCTATTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.2

72.3

40.1

Major BPS

54.8

0.12

1.4

55.1

42.1

Major PPT

79.5

0.66

0.9

73.9

35.4

Minor 5ss

57.2

0.24

2.5

74.8

41.2

Minor BPS

44.6

-0.5

2.3

55.43

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037440

111268038 - 111385874

117837