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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111470630_111471828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111470630 - 111471828

Intron Length:

1199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGAAC

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TATATGTTAAGT

Flanking Amino Acid:

NIQLPHTLLSRFDLIFLMLD

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

66.1

39.5

Major BPS

71.4

0.53

67.3

39.3

Major PPT

88.3

0.86

0.7

80.7

31.3

Minor 5ss

31.6

-2.1

3.3

42.7

44.4

Minor BPS

49.1

0.01

2.3

73.25

43.6

Associated Gene:

Gene:

MCM4

Ensembl Gene ID:

ENSAPLG00000003491

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003586

111469046 - 111479820

10775