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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111472674_111474410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111472674 - 111474410

Intron Length:

1737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGTTTTTTATTA

Flanking Amino Acid:

SIYEHEDIKKGILLQLFGGS

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

73.5

33.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

81.1

0.7

0.9

82.3

34.1

Minor 5ss

42.5

-0.8

55.3

48.9

Minor BPS

0.37

1.5

71.06

35.7

Associated Gene:

Gene:

MCM4

Ensembl Gene ID:

ENSAPLG00000003491

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003586

111469046 - 111479820

10775