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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111484770_111485480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111484770 - 111485480

Intron Length:

711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTAAATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAAAT

Flanking Amino Acid:

VDQKRYAVHLAGLQLFSFHA

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.8

33.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.6

0.71

0.9

75.2

38.3

Minor 5ss

35.5

-1.6

3.2

47.7

Minor BPS

72.8

0.79

1.3

84.4

36.4

Associated Gene:

Gene:

PRKDC

Ensembl Gene ID:

ENSAPLG00000002697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002793

111480367 - 111556614

76248