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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111504484_111505403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111504484 - 111505403

Intron Length:

920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ATTTCTTCGAAT

Flanking Amino Acid:

LETCQQDFWELLEKELLNES

Intron Amino Acid Position:

1360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

75.3

40.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

90.3

0.91

0.6

84.6

30.3

Minor 5ss

40.6

-1

3.2

58.1

46.3

Minor BPS

59.1

0.37

1.7

78.83

37.1

Associated Gene:

Gene:

PRKDC

Ensembl Gene ID:

ENSAPLG00000002697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002793

111480367 - 111556614

76248