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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111506834_111507169_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111506834 - 111507169

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TATACCTTAATT

Flanking Amino Acid:

LQLSFAIDDQCEELLSLLLN

Intron Amino Acid Position:

1527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.5

39.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

77.4

0.62

73.6

40.4

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

82.1

1.09

1.1

90.34

33.1

Associated Gene:

Gene:

PRKDC

Ensembl Gene ID:

ENSAPLG00000002697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002793

111480367 - 111556614

76248