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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111510030_111511014_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111510030 - 111511014

Intron Length:

985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTTCTTTTAGT

Flanking Amino Acid:

TDQNLSLNLKGQAVIILPFF

Intron Amino Acid Position:

1692

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

75.6

35.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

86.1

0.81

0.6

85.6

21.8

Minor 5ss

39.9

-1.1

2.9

44.2

Minor BPS

66.5

0.6

1.9

87.77

37.8

Associated Gene:

Gene:

PRKDC

Ensembl Gene ID:

ENSAPLG00000002697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002793

111480367 - 111556614

76248