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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111512280_111513664_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111512280 - 111513664

Intron Length:

1385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGACT

5'SS Class:

strong_major

3'SS Sequence:

TATTTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

CTTTGCTTATTT

Flanking Amino Acid:

MDALNSRFTKSNECIFDTQV

Intron Amino Acid Position:

1860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.8

36.4

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

87.2

0.84

0.8

84.8

35.4

Minor 5ss

-1

3.1

58.1

46.3

Minor BPS

58.8

0.35

2.1

79.24

43.6

Associated Gene:

Gene:

PRKDC

Ensembl Gene ID:

ENSAPLG00000002697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002793

111480367 - 111556614

76248