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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111516582_111518133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111516582 - 111518133

Intron Length:

1552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

AASSARFRRKETSEYMVLKD

Intron Amino Acid Position:

2072

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

76.8

34.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.3

0.6

93.4

22.5

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

PRKDC

Ensembl Gene ID:

ENSAPLG00000002697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002793

111480367 - 111556614

76248