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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111525477_111526077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111525477 - 111526077

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTCCTATTAAAA

Flanking Amino Acid:

EHPLSECKFQDFVIDSSWRY

Intron Amino Acid Position:

2591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

80.2

34.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

31.4

-2.1

2.9

42.5

44.3

Minor BPS

54.5

0.14

1.7

67.07

38.8

Associated Gene:

Gene:

PRKDC

Ensembl Gene ID:

ENSAPLG00000002697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002793

111480367 - 111556614

76248