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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111545741_111549001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111545741 - 111549001

Intron Length:

3261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TAATGAACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

CTGTATTTAACA

Flanking Amino Acid:

LGLMRKRFIQAFGKDFNSHF

Intron Amino Acid Position:

3643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

76.4

39.6

Major BPS

79.5

0.73

0.9

36.9

Major PPT

60.5

0.24

51.9

41.3

Minor 5ss

35.2

-1.7

3.5

48.8

47.4

Minor BPS

66.4

0.51

1.5

71.81

40.6

Associated Gene:

Gene:

PRKDC

Ensembl Gene ID:

ENSAPLG00000002697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002793

111480367 - 111556614

76248