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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111555357_111556409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111555357 - 111556409

Intron Length:

1053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCTATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTCCTCTTAATA

Flanking Amino Acid:

LTGCNPARITCDELRLGYEK

Intron Amino Acid Position:

4069

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.6

37.4

Major BPS

0.92

0.9

86.2

29.1

Major PPT

72.6

0.51

0.9

70.5

35.2

Minor 5ss

38.4

-1.3

3.1

47.7

42.5

Minor BPS

73.1

0.72

1.2

76.1

35.4

Associated Gene:

Gene:

PRKDC

Ensembl Gene ID:

ENSAPLG00000002697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002793

111480367 - 111556614

76248