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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111810780_111817599_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

111810780 - 111817599

Intron Length:

6820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGGTAAGT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

AGTACTTTATCC

Flanking Amino Acid:

FLPWGYDLSQVLIAAYLLTG

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.1

58.1

40.9

Major BPS

75.1

0.62

65.6

Major PPT

91.7

0.94

0.5

88.6

21.1

Minor 5ss

30.1

-2.3

3.3

39.8

40.2

Minor BPS

58.1

0.23

1.6

66.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002529

111799735 - 111834488

34754