Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_111967738_111975455_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111967738 - 111975455

Intron Length:

7718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAAAA

5'SS Class:

major

3'SS Sequence:

CATTTCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTCCCAAAACA

Flanking Amino Acid:

KQKLQDEAYQASCSQTDNES

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

33.3

Major BPS

78.6

0.71

78.6

Major PPT

74.9

0.56

0.9

70.2

34.8

Minor 5ss

25.9

-2.8

30.2

43.1

Minor BPS

59.7

0.3

78.13

38.1

Associated Gene:

Gene:

DTNA

Ensembl Gene ID:

ENSAPLG00000015988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039305

111967582 - 112061106

93525

ENSAPLT00000016713

111967582 - 112061106

93525