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Intron Name: Anas_platyrhynchos_platyrhynchos_2_111977290_111979674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111977290 - 111979674

Intron Length:

2385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

GAGTGCTGACAC

Flanking Amino Acid:

GGDVQEAFAQSARRNLRNDL

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

82.7

0.74

0.8

80.6

31.5

Minor 5ss

40.5

-1.1

Minor BPS

40.6

-0.7

2.1

46.56

41.8

Associated Gene:

Gene:

DTNA

Ensembl Gene ID:

ENSAPLG00000015988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016713

111967582 - 112061106

93525

ENSAPLT00000039305

111967582 - 112061106

93525

ENSAPLT00000036959

111972270 - 112155397

183128