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Intron Name: Anas_platyrhynchos_platyrhynchos_2_11232821_11241301_F

Intron Information:

Intron Rank:

135806

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11232821 - 11241301

Intron Length:

8481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTGGTTTCTTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCAAAT

U12 Branch Point Sequence:

GTGAGCAAATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.8

38.5

Major BPS

53.3

0.08

1.1

Major PPT

57.5

0.17

1.7

69.3

41.8

Minor 5ss

35.1

-1.7

2.7

42.5

44.3

Minor BPS

35.6

-1.1

2.2

44.53

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046489

11232527 - 11242350

9824