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Intron Name: Anas_platyrhynchos_platyrhynchos_2_112365464_112399912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112365464 - 112399912

Intron Length:

34449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

AATCTATTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTTTTAAAT

Flanking Amino Acid:

EREARENGSKSPAHSYSSYD

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.4

0.64

0.9

74.4

39.4

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

74.5

0.85

1.2

85.98

33.4

Associated Gene:

Gene:

NOL4

Ensembl Gene ID:

ENSAPLG00000006341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006577

112290762 - 112449459

158698

ENSAPLT00000019073

112299098 - 112437298

138201