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Intron Name: Anas_platyrhynchos_platyrhynchos_2_112437156_112440940_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112437156 - 112440940

Intron Length:

3785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTACACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGACAT

U12 Branch Point Sequence:

TTTCTCTACACA

Flanking Amino Acid:

LLNLNDASSSDLQPPSTTAA

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

80.8

0.69

0.8

76.7

30.9

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

51.7

0.05

2.1

72.02

40.3

Associated Gene:

Gene:

NOL4

Ensembl Gene ID:

ENSAPLG00000006341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026933

112400843 - 112449459

48617

ENSAPLT00000006577

112290762 - 112449459

158698