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Intron Name: Anas_platyrhynchos_platyrhynchos_2_112441022_112449265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112441022 - 112449265

Intron Length:

8244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTATCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AGGATCTGAACC

Flanking Amino Acid:

TTNVQSPSNSGPTDLSMKRQ

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

77.8

38.7

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

76.9

0.61

0.9

70.5

40.2

Minor 5ss

30.5

-2.2

2.9

41.4

Minor BPS

53.4

0.09

1.5

59.18

39.3

Associated Gene:

Gene:

NOL4

Ensembl Gene ID:

ENSAPLG00000006341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026933

112400843 - 112449459

48617

ENSAPLT00000006577

112290762 - 112449459

158698