Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_112475498_112483281_R

Intron Information:

Intron Rank:

134803

Intron Class:

major

Intron Phase:

Intron Coordinates:

112475498 - 112483281

Intron Length:

7784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAATATT

5'SS Class:

major

3'SS Sequence:

GCAACCTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TTTTGTGCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

80.6

33.5

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

67.4

0.39

0.9

62.2

39.5

Minor 5ss

36.1

-1.6

3.1

51.6

45.1

Minor BPS

46.9

-0.2

2.5

70.01

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024575

112468716 - 112483528

14813