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Intron Name: Anas_platyrhynchos_platyrhynchos_2_112517785_112518241_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
112517785 - 112518241

Intron Length:
457

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACTCTT

5'SS Class:
strong_major

3'SS Sequence:
ATTTGTTTTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTCAA

U12 Branch Point Sequence:
TTTTGTTCAATA

Flanking Amino Acid:
AQGWKQRLAEGEFTPEMQLR

Intron Amino Acid Position:
199

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.6
0.79
1.1
81.8
38.5

Major BPS
75.6
0.64
1.1
77.7
37.1

Major PPT
83.4
0.75
0.8
81.7
35.4

Minor 5ss
45.7
-0.5
2.9
67.7
43.2

Minor BPS
58.7
0.27
1.9
75.09
37.1

Associated Gene:

Gene:
ASXL3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

112503586 - 112602504
98919

112503586 - 112555607
52022

112503586 - 112560490
56905

112503586 - 112563435
59850