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Intron Name: Anas_platyrhynchos_platyrhynchos_2_112701145_112703591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112701145 - 112703591

Intron Length:

2447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

ATGTTCTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGAATACTAACA

Flanking Amino Acid:

SKNLFKENHEKLSYLDRRLQ

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

79.4

0.66

0.9

70.6

40.6

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

46.8

-0.2

1.9

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040682

112648873 - 112826943

178071

ENSAPLT00000030580

112648873 - 112826943

178071