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Intron Name: Anas_platyrhynchos_platyrhynchos_2_11270390_11274887_F

Intron Information:

Intron Rank:

124367

Intron Class:

major

Intron Phase:

Intron Coordinates:

11270390 - 11274887

Intron Length:

4498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

ATGTCCAGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

71.6

0.54

33.1

Major PPT

81.1

0.7

0.8

75.9

32.8

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

47.4

-0.1

1.9

68.37

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027314

11270162 - 11282843

12682

ENSAPLT00000047043

11270162 - 11291984

21823