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Intron Name: Anas_platyrhynchos_platyrhynchos_2_11274965_11280578_F

Intron Information:

Intron Rank:

124368

Intron Class:

major

Intron Phase:

Intron Coordinates:

11274965 - 11280578

Intron Length:

5614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTAG

5'SS Class:

major

3'SS Sequence:

AAATTTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTGCTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

69.7

37.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.1

0.5

0.9

63.4

42.9

Minor 5ss

42.1

-0.9

2.8

55.1

43.4

Minor BPS

69.7

0.7

1.9

86.76

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047043

11270162 - 11291984

21823

ENSAPLT00000027314

11270162 - 11282843

12682