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Intron Name: Anas_platyrhynchos_platyrhynchos_2_11280631_11282044_F

Intron Information:

Intron Rank:

124369

Intron Class:

major

Intron Phase:

Intron Coordinates:

11280631 - 11282044

Intron Length:

1414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTAA

5'SS Class:

major

3'SS Sequence:

TGGTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TCTTCTCAAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.4

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

83.2

0.75

0.9

80.8

36.8

Minor 5ss

42.2

-0.9

3.1

55.3

48.9

Minor BPS

46.5

-0.2

2.2

63.12

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027314

11270162 - 11282843

12682