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Intron Name: Anas_platyrhynchos_platyrhynchos_2_112944968_112952473_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
112944968 - 112952473

Intron Length:
7506

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAAAACC

5'SS Class:
strong_major

3'SS Sequence:
CCCTATCCTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAC

U12 Branch Point Sequence:
TTTTCTTTCACC

Flanking Amino Acid:
SWIQLPPMQERRASFYACRL

Intron Amino Acid Position:
409

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.2
0.76
0.9
74.9
33.2

Major BPS
77.7
0.69
1
81
30.2

Major PPT
76.6
0.6
0.8
72.9
31.6

Minor 5ss
34.1
-1.8
3
44.4
43.1

Minor BPS
75.5
0.79
1.6
85.93
32.4

Associated Gene:

Gene:
KLHL14

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

112895398 - 112956830
61433

112896799 - 112956482
59684

112895398 - 112956535
61138

112895963 - 112956830
60868