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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113005269_113010549_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

113005269 - 113010549

Intron Length:

5281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCATTG

5'SS Class:

weak_major

3'SS Sequence:

ATTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GACTCTTTATCC

Flanking Amino Acid:

RVVPKRKGEKLAWEHGIHFF

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

65.1

41.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

61.2

0.38

2.4

73.4

43.4

Minor BPS

59.3

0.27

1.6

64.02

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006964

112989180 - 113020044

30865