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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113103209_113110898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113103209 - 113110898

Intron Length:

7690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTCCCT

5'SS Class:

major

3'SS Sequence:

TGTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTGTTATTT

Flanking Amino Acid:

VMEEITFNVKVASGECNEDT

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

59.1

45.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.3

0.82

0.8

80.8

36.4

Minor 5ss

39.2

-1.2

3.4

57.5

46.6

Minor BPS

50.8

0.1

2.2

75.9

41.4

Associated Gene:

Gene:

GAREM1

Ensembl Gene ID:

ENSAPLG00000006848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007115

113026337 - 113122093

95757