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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113112078_113117654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113112078 - 113117654

Intron Length:

5577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTCAG

5'SS Class:

major

3'SS Sequence:

TTCTTTTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TTCTTTTGTACA

Flanking Amino Acid:

PPPVPPKSEAVKEECRLLNA

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

62.9

43.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

86.6

0.82

0.8

83.2

Minor 5ss

35.8

-1.6

2.9

46.9

42.4

Minor BPS

51.4

0.04

1.8

66.96

39.5

Associated Gene:

Gene:

GAREM1

Ensembl Gene ID:

ENSAPLG00000006848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007115

113026337 - 113122093

95757