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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113117822_113120965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113117822 - 113120965

Intron Length:

3144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGTGTG

5'SS Class:

major

3'SS Sequence:

TTTGTTCCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TTTGTACTAACT

Flanking Amino Acid:

LSYYSSGLHNINVTENDNAN

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

70.9

39.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

76.2

0.59

80.3

32.2

Minor 5ss

44.8

-0.6

3.1

61.8

43.3

Minor BPS

54.7

0.23

81.5

39.9

Associated Gene:

Gene:

GAREM1

Ensembl Gene ID:

ENSAPLG00000006848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007115

113026337 - 113122093

95757