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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113152067_113152111_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
113152067 - 113152111

Intron Length:
45

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAA|GTATAACAA

5'SS Class:
major

3'SS Sequence:
TAGTTGAATTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTAAC

U12 Branch Point Sequence:
GTTAGTTGAATT

Flanking Amino Acid:
DIRQRMSNQRNVLSNTFKTQ

Intron Amino Acid Position:
415

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.4
0.29
1.1
56.6
36.1

Major BPS
73.1
0.57
0.9
73.7
27.1

Major PPT
67.3
0.39
1.1
63.7
45.9

Minor 5ss
38.4
-1.3
3.2
47
43

Minor BPS
49.3
0.03
1.9
70.19
41

Associated Gene:

Gene:
MEP1B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

113149329 - 113166155
16827