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Intron Name: Anas_platyrhynchos_platyrhynchos_2_113186414_113187240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113186414 - 113187240

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

CTCCCAAATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

NRHLYQIVPVICPICVSLPW

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.5

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.9

0.38

63.1

36.3

Minor 5ss

-1.1

2.9

57.4

41.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

RNF138

Ensembl Gene ID:

ENSAPLG00000019822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028319

113184718 - 113190481

5764